To see other biotech frequently asked questions,
please visit http://biotech.fyicenter.com/faq/
What is included in this FAQ collection?
- Help and Support
- How do I report bugs ?
- Are there any mailing lists about EMBOSS?
- Where's the documentation?
- Where's the applications' documentation?
- Is there a tutorial?
- Is there a quick guide?
- Is there a table of substitutes for GCG programs?
- Is there a reference I can cite for EMBOSS?
- Installation & Compilation
- How do I compile EMBOSS?
- I have an AMD64/Opteron/EM64T system. How do I prevent the compiled...
- I have a Linux system and compilation ends prematurely saying...
- I'm trying to compile EMBOSS with the PNG support
- When installing EMBOSS recently I get a load of errors due to...
- Can I get the latest code via CVS ?
- How do I compile the CVS version?
- Installing associated software MSE.
- Installing associated software PHYLIP
- Problems finding PHYLIP acd files ?
- What benefits do i gain from using the associated versions...
- I have Emboss installed on our development server and I'm preparing...
- I have downloaded the Emboss source and installed it for use at XYZ...
- I am not getting full static files even when I configure with...
- Graphics
- What Graphics options are available?
- How do i get the PNG driver?
- Where to look for the additional libraries needed for PNG.
- Plotters and pen colours.
- Browsing the Gnu site I came across libplot, libxmi and plot utils...
- I am trying to compile PNG support into EMBOSS on our CTU Unix system...
- I get error messages when I try to display X11 on my PC...
- Data Files
- How do I use my own private data file?
- Sequence Files and Formats
- How do you write sequences to different files instead of writing them...
- What sequence formats are supported?
- What is the difference between TEXT and RAW formats?
- What is ASIS format?
- I have some very short protein sequences that EMBOSS thinks are...
- Limits and contraints
- Is there a maximum size for sequences?
- GCG has a somewhat arbitrary fragment length limit of 2500 bp for gel*...
- Running under Web servers and from scripts
- I am trying to write a web interface for an emboss program...
- Programs and options
- Plotting with pepwheel gives interesting output...
- In prettyplot, How do you specify an output file name for the plot file?
- In the editor 'mse', but I don't know how to save my edited sequences...
- I would like to know if EMBOSS can perform nucleotide contig assembly...
(Continued on next question...)
