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Database name |
Full name and/or description |
URL |
Genew |
Human gene nomenclature: approved gene symbols |
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GO |
Gene ontology consortium database |
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GOA |
EBI's gene ontology annotation project |
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IUBMB Nomenclature database |
Nomenclature of enzymes, membrane transporters, electron transport proteins and other proteins |
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IUPAC Nomenclature database |
Nomenclature of biochemical and organic compounds approved by the IUBMB-IUPAC Joint Commission |
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IUPHAR-RD |
The International Union of Pharmacology recommendations on receptor nomenclature and drug classification |
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PANTHER |
Gene products organized by biological function |
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UMLS |
Unified medical language system |
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Database name |
Full name and/or description |
URL |
COG |
Clusters of orthologous groups of proteins |
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COGENT |
Complete genome tracking: predicted peptides from fully sequenced genomes |
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CORG |
Comparative regulatory genomics: conserved non-coding sequence blocks |
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DEG |
Database of essential genes from bacteria and yeast |
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EBI Genomes |
EBI's collection of databases for the analysis of complete and unfinished viral , pro- and eukaryotic genomes |
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EGO |
Eukaryotic gene orthologs: orthologous DNA sequences in the TIGR gene indices |
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EMGlib |
Enhanced microbial genomes library: completely sequenced genomes of unicellular organisms |
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Entrez Genomes |
NCBI's collection of databases for the analysis of complete and unfinished viral , pro- and eukaryotic genomes |
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ERGO |
Light Integrated biochemical data on nine bacterial genomes: publicly available portion of the ERGO database |
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FusionDB |
Database of bacterial and archaeal gene fusion events |
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Genome Atlas |
DNA structural properties of sequenced genomes |
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Genome Information Broker |
DDBJ's collection of databases for the analysis of complete and unfinished viral , pro- and eukaryotic genomes |
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Genome Reviews |
Integrated view of complete genomes |
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GOLD |
Genomes online database: a listing of completed and ongoing genome projects |
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HGT-DB |
Putative horizontally transferred genes in prokaryotic genomes |
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Integr8 |
Functional classification of proteins in whole genomes |
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KEGG |
Kyoto encyclopedia of genes and genomes: integrated suite of databases on genes , proteins and metabolic pathways |
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MBGD |
Microbial genome database for comparative analysis |
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ORFanage |
Database of orphan ORFs (ORFs with no homologs) in complete microbial genomes |
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PACRAT |
Archaeal and bacterial intergenic sequence features |
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PartiGeneDB |
Assembled partial genomes for _ 250 eukaryotic organisms |
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PEDANT |
Results of an automated analysis of genomic sequences |
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TIGR Microbial Database |
Lists of completed and ongoing genome projects with links to complete genome sequences |
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TIGR Comprehensive Microbial Resource |
Various data on complete microbial genomes: uniform annotation, properties of DNA and predicted proteins |
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TransportDB |
Predicted membrane transporters in complete genomes, classified according to the TC classification system |
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WIT3 |
What is there ? Metabolic reconstruction for completely sequenced microbial genomes |
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