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EMBOSS FAQ (Frequently Asked Questions)
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If, on the other hand, you did not do a 'make install' then:
1) Go to the emboss directory
cd EMBOSS-2.10.0
2) make new directory embassy if it does not exist already.
mkdir embassy
3) Go into that directory
cd embassy
4) gunzip and untar the file
gunzip MSE-1.0.0.tar.gz
tar xvf MSE-1.0.0.tar
5) go into the mse directory
cd MSE-1.0.0
6) configure and compile
./configure (use same options as you used to compile emboss)
make
Q) Installing associated software PHYLIP
A) a) from the anonymous cvs code.
1) Go to the phylip directory
cd embassy/phylip
2) make the configuration file
aclocal
autoconf
automake
3) configure and compile
./configure (use same options as you used to compile emboss)
make
make install
b) from PHYLIP-3.6b.tar.gz
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