Tools Molecule - Using Fastsearch Fingerprint Index

Using Fastsearch Fingerprint Index

Q

Where to find FAQ (Frequently Asked Questions) on Using Fastsearch Fingerprint Index with Open Babel?

✍: FYIcenter.com

A

Here is a list of tutorials to answer many frequently asked questions compiled by FYIcenter.com team on Using Fastsearch Fingerprint Index with Open Babel.

"babel ... -o fs" - Generate Fastsearch Index

"babel -i fs ..." - Fingerprint Index Based Search

"babel -i fs ... -s ... -at n" - Top n Similarity Search

"babel -i fs ... -s ... -at score_range" - Similarity Search

"Difficulty opening ..." Error Using Fastsearch Index

"babel -i fs ... -s SMILES" - Substructure Search with Index

"babel -i fs ... -s query_file" - Substructure Search

"babel -i fs ... -s query_file" - Exact Match Search

⇒ "babel ... -o fs" - Generate Fastsearch Index

⇐ "babel -H fpt" - Fingerprint Help Information

⇑⇑ Open Babel Tutorials

2020-09-30, 175👍, 0💬

"babel ... -o fs" - Generate Fastsearch Index
What is Open Babel Fastsearch Index file? How to generate it with the "babel" command? Fastsearch index file is an Open Babel specific binary file that stores pre-calculated fingerprints and their indexes for multiple molecules. Fastsearch index file can improve similarty search significantly faster... 2020-08-25, 193👍, 0💬

"babel ... -f # -l #" - Split Large Molecule File
How to split a file with a large number of molecules? You can split a file with a large number of molecules into smaller files by extracting a chunk of molecules to the output using the "-f #" and "-l #" options. The "-f #" option specifies the index of the first molecule to be extrancted. The "-l #... 2020-09-30, 177👍, 0💬

Using Fastsearch Fingerprint Index
Where to find FAQ (Frequently Asked Questions) on Using Fastsearch Fingerprint Index with Open Babel? Here is a list of tutorials to answer many frequently asked questions compiled by FYIcenter.com team on Using Fastsearch Fingerprint Index with Open Babel. "babel ... -o fs" - Generate Fastsearch In... 2020-09-30, 176👍, 0💬

What Is Tanimoto coefficient
What Is Tanimoto coefficient? Tanimoto coefficient is a metric (or score) to measure the similarity of two sets of elements. Tanimoto coefficient can be simply defined as the ratio of the intersection of the two sets over the union of the two sets. More precisely, the Tanimoto coefficient of set A a... 2020-09-30, 160👍, 0💬

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