What are JSME user interface menu icons?

JSME user interface menu icons are organized into 3 groups:

1. Action Icons - Located on in the first icon bar on top of the editor. Actions icons allows you to perform the following actions:

• SMILES - Displays the SMILES string of everything in the editor.
• Delete All - Removes all atoms and bonds in the editor.
• New - Allows you to starts a new molecule in the editor.
• Delete - Allows you to delete an atom or bond by clicking on it.
• Number - Allows you to do atom numbering.
• Delete Substructure - Allows you to do delete a substructure.
• Query - Allows you add query atoms and query bonds.
• Charge - Allows you to change charged states on atoms.
• Reaction - Allows you to add reaction input.
• Undo - Undoes the last change.
• Redo - Redoes the last undo.
• Spiro - Flags the next ring to be a spiro ring.
• Version - Displays version information.

2. Structure Icons - Located on in the second icon bar on top of the editor. Structure icons allows you to change the next drawing structure parts:

• Stereo Bond - Changes the stereo bond types and directions.
• Single Bond - Draws a single bond or changes an existing bound to single bond.
• Double Bond - Draws a double bond or changes an existing bound to double bond.
• Triple Bond - Draws a triple bond or changes an existing bound to triple bond.
• Bond Chain - Draws a chain of bounds.
• Square Ring - Draws a square ring.
• Pentagon Ring - Draws a pentagon ring.
• Hexagon Ring - Draws a hexagon ring.
• Heptagon Ring - Draws a heptagon ring.
• Octagon Ring - Draws an octagon ring.
• Functional Group - Draws a functional group.
• Move Atom - Moves an atom.

3. Element Icons - Located on in the side bar on the left of the editor. Element icons allows you to change the element name of the select atom.

• C - Carbon
• N - Nitrogen
• O - Oxygen
• S - Sulfur
• F - Fluorine
• CI - Chlorine
• Br - Bromine
• I - Iodine
• P - Phosphorus
• X - Input for other elements

The following picture shows locations of some menu icons on the JSME user interface (Source: ucd.ie).

⇒ Show InChI and InChIKey on JSME

⇐ JSME Molecule Editor User Interface

⇑ JSME Molecule Editor User Interface

⇑⇑ JSME Tutorials