Install BioPerl Package Manually
How to install BioPerl package manually? I am having trouble using the "cpan/cpanm" command.
✍: FYIcenter.com
If you are having problems using the "cpan/cpanm" command,
you can following this tutorial to install the BioPerl 1.7.7
distribution package manually.
1. Go to metacpan.org/pod/BioPerl.
2. Click "Download (7.18Mb)" link. And save the download file as BioPerl-1.7.7.tar.gz.
3. Unzip and untar the download file. You see the sub-directory: ./BioPerl-1.7.7
4. Go to the sub-directory and run the following commands to prepare the installation:
fyicenter$ cd BioPerl-1.7.7 fyicenter$ perl Makefile.PL
5. Use the "make" utility to install the package.
fyicenter$ make test fyicenter$ sudo make install
6. Install all modules that are required by BioPerl. You will see missing modules listed as errors, if you run some BioPerl scripts.
⇒ OBF (Open Bioinformatics Foundation) Tools
⇐ Install BioPerl Package with "cpanm"
2024-02-05, 1216🔥, 2💬
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