Ketcher user interface menu icons are organized into 4 toolbars:
1. Action toolbar -
Displayed horizontally at the top of the window,
the main toolbar contains the following buttons
to perform different actions:
Clear canvas - Removes everything in the editor.
Open - Imports structure from local structure files or copy-paste content.
Save as - Exports structure from the editor in multiple formats.
Copy - Copies the selected sub-structure to other applications.
Paste - Pastes structures copies from other applications.
Cut - Cuts the selected sub-structure off.
Undo - Undo the last change on the structure.
Redo - Redo the last undo change.
Aromatize - Converts the structure to Aromatic presentation.
Dearomatize - Converts the structure to Kekule presentation.
Layout - Adjusts the layout of the structure.
Clean up - Adjusts bond lengths and angles of the structure.
Calculate CIP - Determines R/S and E/Z configurations.
Check - Checks the structure for errors.
Calculated values - Displays chemical properties.
3D viewer - Opens the structure in a 3D viewer.
Settings - Displays and updates settings.
Help - Displays the user guide in a Web browser.
About - Displays version information.
Fullscreen mode - Changes the Ketcher editor to full screen mode.
Zoom - Displays the current zoom percentage and changing options.
2. Drawing toolbar -
Displayed vertically at the left of the window,
the drawing toolbar contains the following buttons
to edit the structure:
Hand tool - Allows you to move the structure.
Selection tool - Allows you to select sub-structure
in rectangle, lasso or fragment selection mode.
Erase tool - Allows you to erase parts of the structure.
Bond tool - Allows you to add different types of bonds including any bonds.
Chain tool - Allows you to draw chains of carbons.
Stereochemistry tool - Allows you to assign and
display enhanced stereochemistry properties of the structure.
Charge plus - Allows you to increase the charge of an atom by 1.
Charge minus - Allows you to decrease the charge of an atom by 1.
Rotate tool - Allows you to rotate or flip the selected sub-structure.
S-Group tool - Allows you to mark S-Groups.
Reaction plus - Allows you to add the plus mark for a reaction structure.
Arrow tool - Allows you to add different types of arrows for a reaction structure.
Reaction mapping - Allows you to map same atoms in reagents and products.
R-Group label - Allows you to draw R-groups in Markush structure.
Shape tool - Allows you to draw geometry shapes.
Text tool - Allows you to dd text to the structure.
3. Atoms toolbar -
Displayed vertically at the right of the window,
the atoms toolbar contains the following buttons
to add or change atoms in the structure:
H - Hydrogen
C - Carbon
N - Nitrogen
O - Oxygen
S - Sulfur
F - Fluorine
CI - Chlorine
Br - Bromine
I - Iodine
PT - Periodic Table
A - Any atom
ET - Extended table
4. Templates toolbar -
Displayed horizontally at the bottom of the window,
the Templates toolbar contains the following buttons
to add predefined structures:
Benzene
Cyclopentadiene
Cyclohexane
Cyclopentane
Cyclopropane
Cyclobutane
Cycloheptane
Cyclooctane
Custom templates
The following picture shows locations of those toolbars.
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