General Molecule Tools

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biotech.FYIcenter.com Links
Collections: Molecule FAQ SDF/Mol File FAQ PyMol Tutorials JSME Tutorials Interview Questions Tools and Resources Glossary of Terminologies Other Information Other Resources: Software QA Resources Developer Resources DBA Resources Windows Tutorials Java JAR Files DLL Files File Extensions Security C... 2020-05-19, 352👍, 0💬

chem.nlm.nih.gov ChemIDplus Database
What is chem.nlm.nih.gov ChemIDplus Database? chem.nlm.nih.gov ChemIDplus Database contains over 108,000 molecules. ChemIDplus is created from more than 100 sources. The core sources of substance records correspond to those substances that are cited in one or more of the National Library of Medicine... 2020-04-17, 322👍, 0💬

cactus.nci.nih.gov - Generate SDF File
What is SDF generator service provided by cactus.nci.nih.gov? The SDF generator service provided by cactus.nci.nih.gov allows you to generate the SDF (Structure Data File) from any given molecule in SMILES (Simplified Molecular-Input Line-Entry System) string. To use the SDF generator service, you n... 2020-04-16, 275👍, 0💬

What Is SDF/Mol File Format
What Is SDF/Mol file format? SDF (Structural Data File), also call Mol file, is a text file to represent one or multiple molecule Structures and their associated properties. SDF was developed and published by Molecular Design Limited (MDL) and became the the most widely used standard for importing a... 2020-04-16, 266👍, 0💬

Online Tools for SDF/Mol File
Where to find FAQ (Frequently Asked Questions) on online tools for SDF/Mol files? I want to use them to create, validate or convert them. Here is a list of tutorials to answer many frequently asked questions compiled by FYIcenter.com team on molecule online tools. SDF/Mol File 2D Viewer SDF Generato... 2020-04-16, 264👍, 0💬

chemdb.niaid.nih.gov - Molecule Compounds Against HIV
What is chemdb.niaid.nih.gov's Molecule Compounds Against HIV? chemdb.niaid.nih.gov offers a searchable database of over 40,000 Molecule Compounds Against HIV. You can search the database by structure, molecule names, chemical properties, or HIV targets. Molecule Online Database - chemdb.niaid.nih.g... 2020-04-17, 243👍, 0💬

SDF/Mol File FAQ
Where to find molecule FAQ (Frequently Asked Questions)? I want to learn more about SDF/Mol file format. Here is a large collection of tutorials to answer many frequently asked questions compiled by FYIcenter.com team about SDF/Mol file format and tools to manipulate them: Introduction to SDF/Mol Fi... 2020-04-16, 212👍, 0💬

SDF File Format Specification
What are SDF (Structural Data File) format specifications? Here is summary of SDF (Structural Data File) format specifications: 1. Text File - A SDF in a text file to store multiple molecule structures. 2. Structure Separator Line ($$$$) - Each molecule structure is separated from others by the "$$$... 2020-04-16, 211👍, 1💬

💬 2020-04-16 Ivan: Thanks for sharing the information!

SDF Generator from SMILES
How to generate the molecule structure in SDF format from a SMILES string? To help you to generate the molecule structure in SDF format from a SMILES string, FYIcenter.com has designed this online tool. All you need to do is to enter the SMILES string in the form below, and click the "Go" button. Th... 2020-04-21, 202👍, 0💬

About biotech.FYIcenter.com
biotech.FYIcenter.com is a Website for biotech professionals looking for biotech resources, software tools, career information, and so on. Just browse through the site, you will find the best information our team has prepared for you. Other FYIcenter.com Resources: Software QA Resources Developer Re... 2020-04-16, 200👍, 0💬

SDF/Mol File 2D Viewer
How to view the molecule structure specified in a SDF/Mol file? To help you to view the molecule structure specified in a SDF/Mol file, FYIcenter.com has designed this online tool. All you need to do is to copy and paste the SDF/Mol file content in the form below, and click the "Go" button. The mole... 2020-04-21, 190👍, 0💬

JSME Tutorials
Where to find FAQ (Frequently Asked Questions) on JSME, Molecule Editor in JavaScript? I want to learn more about JSME. Here is a large collection of tutorials to answer many frequently asked questions compiled by FYIcenter.com team on JSME, Molecule Editor in JavaScript: Introduction to JSME What I... 2020-05-19, 186👍, 0💬

cactus.nci.nih.gov/translate - Convert to/from SDF
What is cactus.nci.nih.gov/translate SDF translator? pubcactus.nci.nih.gov/translat eSDF translator allows you to translate SDF files from and to other types of files, including SMILES, SD, MOL, etc. SDF Online Tool - pubchem.ncbi.nlm.nih.gov   For more information, visit cactus.nci.nih.gov/translat... 2020-04-16, 186👍, 0💬

sdf2svg - PHP Script to Convert SDF to SVG
How to convert Convert SDF to SVG (Scalable Vector Graphics) using "sdf2svg" PHP script? I want to see the molecule structure as a SVG file. If you want to convert molecule structures in SDF format to SVG (Scalable Vector Graphics) format to be viewed on Web pages directly, you can download and inst... 2020-04-16, 185👍, 0💬

Molecule Online Dabases
Where to find FAQ (Frequently Asked Questions) on molecule online databases? I want to use them to search molecules and their properties. Here is a list of tutorials to answer many frequently asked questions compiled by FYIcenter.com team on molecule online Databases. pubchem.ncbi.nlm.nih.gov Molecu... 2020-04-17, 184👍, 0💬

dtp.cancer.gov Basic Chemical Database
What is dtp.cancer.gov Basic Chemical Database? chedtp.cancer.gov Basic Chemical Database offers 4 ways to search for DTP open compound collection of 250,000 molecules: Structure search Basic chemical data search Chemical names search Smiles search Molecule Online Database - dtp.cancer.gov For more ... 2020-04-17, 183👍, 0💬

Convert SDF to SVG using Open Babel
How to convert Convert SDF to SVG (Scalable Vector Graphics) using Open Babel? I want to see the molecule structure as a SVG file. If you want to see the molecule structure specified in a SDF file, you can convert it to a SVG (Scalable Vector Graphics) file using the "Open Babel" tool. 1. Download a... 2020-04-16, 181👍, 0💬

ebi.ac.uk - ChEMBL Compound Database
What is ebi.ac.uk ChEMBL Compound Database? ebi.ac.uk ChEMBL Compound Database contains about 2,000,000 molecule compounds, one of the largest molecule database in the world. Molecule Online Database - ChEMBL at ebi.ac.uk For more information, visit www.ebi.ac.uk/chembl/g/#browse /compounds.    ⇒ d... 2020-04-17, 179👍, 0💬

pubchem.ncbi.nlm.nih.gov Molecule Database
What is pubchem.ncbi.nlm.nih.gov Molecule Database? pubchem.ncbi.nlm.nih.gov Molecule Database is the world's largest collection of small molecules with fewer than 1000 atoms and 1000 bonds. You can search pubchem.ncbi.nlm.nih.gov Molecule Database by: Chemical names Molecule formula SMILES and InCh... 2020-04-17, 178👍, 0💬

Build JSME Editor Web Page
How to build my own JSME editor Web Page? If you want to build your Web page and offer JSME as a molecule editor in the middle of the page, you can follow this tutorial. 1. Follow the previous tutorial to install JSME on your Web server. 2. Create a new HTML document, editor.html, to load and run th... 2020-05-18, 171👍, 0💬

Save Molecule from JSME to Server
How to save molecules created in JSME editor to the Web server? If you want to save the molecule structure created in the JSME editor to the backend Web server, you need write JavaScript code to extract the molecule data and send it as HTML form parameters. 1. Create a new HTML document, save-molecu... 2020-05-18, 170👍, 0💬

What Is JSME JavaScript API
What is JSME JavaScript API? I want to see an example on how to use it. JSME JavaScript API is programming interface provided by JSME for your JavaScript code to interact with the JSME editor. JSME JavaScript API offers the following primary methods under the "JSApplet.JSME" class: jsmeObj = new JSA... 2020-05-18, 168👍, 0💬

JS Loading Error - JSME Instance Named as "jsme"
Why I am getting the JavaScript file loading error, if I name the JSME Instance Named as "jsme"? "jsme" is used in JSME JavaScript code for another object. If you use it to name your new JSME object, it will override the other object and cause JavaScript loading errors. 1. Follow the previous tutori... 2020-05-18, 164👍, 0💬

Loading JSME JavaScript in "body"
Can I load JSME JavaScript code in HTML "body" element instead of "head"? Yes, you can load JSME JavaScript code in HTML "body" element instead of "head" 1. Create a new HTML document, load-JSME-in-body.html, with JSME loaded in the "body" element: <html> <head> <t... 2020-05-18, 164👍, 0💬

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General Molecule Tools